Affymetrix snp 6.0 copy number
The Affymetrix SNP Array 6. 0 allows cytogenetic researchers to capture more chromosomal aberrations with highdensity SNPs and highresolution copy number coverage on a single array. The process requires only two primary steps: preparing the DNA for the microarray using the cytogenetics copy number assay, andEach point in Figure Figure1 1 represents a locus (SNP) on the Affymetrix 6. 0 SNP array. As expected for germline data, the locuslevel copy number data are randomly scattered around a value of two, which represents the normal twocopy state. affymetrix snp 6.0 copy number
Oct 31, 2016 For the Affymetrix SNP 6. 0 platform, a set of 947 cancer cell lines 23 published by the Broad Institute, Massachusetts (GEO accession number: GSE ) was analyzed using Affymetrix Power Tools, Nexus Copy Number and Rawcopy.